Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797568.1_cds_XP_016455607.1_4901
CDS Infomation

[gene=LOC107779658] [db_xref=GeneID:107779658] [protein=F-box protein At1g47056-like] [protein_id=XP_016455607.1] [location=join(46068..47629,47772..47814)] [gbkey=CDS]
Sequence

ATGGGTCAATCAGCTTCCACCTTCGCCGGAGCTCATAACCGTATCAAATTCAGATCCTCA
TCGCCGATTTCTTCCATGAAAGATAGCGACGATTCCGACGATGCTGTTATTGATGTATTC
GAAGTCGGAGATTTTGATTATACTAACTATATTCCTGATGAGTGTTTAGCTTGCATTTTC
CAGTCTCTTAGCTCAGGTGACCGGAAAAGTTGTTCTCTCGTCTGCCGCCGTTGGCTCCGC
GTCGAAGGTCAGAGCCGTCACCGTCTCTCTCTCAACGCGCAATCAGACCTTGTAACGGTG
GTTCCTTTGATTTTTTCACGATTCGATTCGGTCACGAAACTCGCTTTGAAATGTGACCGT
AGATCTACGAGTATAGGTGACGAGGCGTTGGTGCTTATCTCGTTACGGTGCCGGAACCTA
ACTCGTTTGAAGCTCCGATCGTGCCGTGAGCTTACTGATGCTGGAATGGAAGCTTTCGCG
AAGAATTGCAAGGGTTTGAAGAAGCTATCTTGTGGATCGTGTGCTTTTGGAGCTAAAGGC
ATGAACGCCGTGTTGAATAACTGCTCGGCGCTGGAAGAGTTGTCGGTAAAGCGCCTACGT
GGCATCACAGATGGCGCGTCGGCTGAGCCGATTGGTCCTGGTGTTGCAGGAGGTTCTCTA
AGAGTTATATGCCTTAAGGAACTGTATAATGGACAGTGTTTTGGACCGTTAATTATTGGA
TCGAAGAATTTGCGGACGCTTAAGCTATTCCGGTGTTCTGGAGATTGGGATAAGCTTCTG
GAAGTGATTGCTGAACAAGTTAGCTGTGGACTTGTTGAAGTTCATCTTGAGAGGCTTCAG
GTAAGTGACACTGGTCTTGCTGCTATTTCTAAATGTTTAAATCTTGAAATTCTGCACCTT
GTGAAAACGCCTGAATGCACTAATATTGGTTTAAAGACTGTTGCTGAACACTGTAAGCTT
TTAAGAAAGCTTCATATTGATGGATGGAAGACTAACAGGATAAGTGATGAAGGGTTAATT
GCTGTGGCAAAGCATTGCCCCAACTTACAAGAATTGGTTTTAATCGGTGTGAACCCGACA
TGTGCTAGTTTGGAGAAGCTGGCTACGAATTGCTTGAATTTAGAGAGATTGGCTTTGTGT
GGAAGTGAAACTGTTGGGGATCCTGAACTGTCGTGCATAGCTGCAAAATGTAATGCTTTG
AGAAAACTCTGTATAAAGAGTTGCCCTGTATCCGATCAGGGTATGGAAGCGCTTGCTGGC
GGATGTCCGAATTTGGTAAAAGTAAAGGTTAAGAAGTGTAGATTGGTGACTTCTGAAAGT
GCAGACTGGTTGAGGACCACTAGGGGTTCTGTGGCCGTGAACTTGGATGCAACTGAACCT
GAAAATCCCGATGCAAGCGCCAGTGATGGTGGTGTCCCTGAAGTTGGGAATGAAAATAGG
CAGGTTGCCGCCCAAGTAGGTGGTGCAAATATTGCATCAAGCAGTACCGGGAGGTCCAAT
TCCTTCAAGGCAAGGCTAGGACTTACAACGGGAAGACATCTGGTGGCTTGCACATTCAGA
AGGTGGTCGAGCTTTGGTGGGAGTTCCAGTTCCAGAAATACTTAG

Peptide Sequence

PEP ID

XP_016455607.1
PEP Infomation

PREDICTED: F-box protein At1g47056-like [Nicotiana tabacum]
Sequence

MGQSASTFAGAHNRIKFRSSSPISSMKDSDDSDDAVIDVFEVGDFDYTNYIPDECLACIF
QSLSSGDRKSCSLVCRRWLRVEGQSRHRLSLNAQSDLVTVVPLIFSRFDSVTKLALKCDR
RSTSIGDEALVLISLRCRNLTRLKLRSCRELTDAGMEAFAKNCKGLKKLSCGSCAFGAKG
MNAVLNNCSALEELSVKRLRGITDGASAEPIGPGVAGGSLRVICLKELYNGQCFGPLIIG
SKNLRTLKLFRCSGDWDKLLEVIAEQVSCGLVEVHLERLQVSDTGLAAISKCLNLEILHL
VKTPECTNIGLKTVAEHCKLLRKLHIDGWKTNRISDEGLIAVAKHCPNLQELVLIGVNPT
CASLEKLATNCLNLERLALCGSETVGDPELSCIAAKCNALRKLCIKSCPVSDQGMEALAG
GCPNLVKVKVKKCRLVTSESADWLRTTRGSVAVNLDATEPENPDASASDGGVPEVGNENR
QVAAQVGGANIASSSTGRSNSFKARLGLTTGRHLVACTFRRWSSFGGSSSSRNT

Transcript Sequence

Gene sequence data has not been registered.